2-D Crystals in IMAGIC
Image processing and image analysis of 2-D crystals
Description
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Standard image manipulations, cutting of images, blow up, rotations, filtering (high-pass, low-pass, etc.), arithmetic operations, Fourier transformations, statistics, complex images, display and plot, etc. |
Negatively stained RuBisCO crystal
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Band-pass filtering, Fourier peak search, Fourier peak filtering, etc. | |
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Correlation averaging, storage of the patches within one (huge) image file, resolution criteria, etc. | |
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Sort co-ordinates, print and impose transfer function, etc. | |
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(Intra-class) averaging, resolution criteria, etc. | |
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Multivariate statistical analysis and classification of the crystal patches, MSA maps, correlation averaging etc. | |
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Many further related commands |
Relevant Pointers
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The IMAGIC image processing and analysis system: |
| Single Particles | |
| 3-D Processing and Reconstruction | |
| 2-D Crystals | |
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Morphology
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IMAGIC EM Package |
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GISP: The GUI oriented IMAGIC Single Particles Analysis |
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IMAGIC Shared Resources
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em2em: 3DEM Image Conversion Program |
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FSC: Program to calculate the Fourier Shell Correlation
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References
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Negatively stained RuBisCO crystal